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Combination antimicrobial susceptibility testing for acute exacerbations in chronic infection of Pseudomonas aeruginosa in cystic fibrosis

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Referencias

References to studies included in this review

Aaron 2005 {published and unpublished data}

Aaron S, Vandemheen K, Ferris W, Tullis E, Haase D, Berthiaume Y, et al. Treatment of CF exacerbations based on multiple combination antibiotic susceptibility testing-a randomized, double-blind, controlled clinical trial. Pediatric Pulmonology 2005;40(Suppl 28):304. [CFGD REGISTER: PI198a] CENTRAL
Aaron S. Clinical evidence for combination antibiotic susceptibility testing (synergy testing). Pediatric Pulmonology 2008;43(Suppl 31):157. [CFGD REGISTER: PI198c] CENTRAL
Aaron SD, Vandemheen KL, Ferris W, Fergusson D, Tullis E, Haase D, et al. Combination antibiotic susceptibility testing to treat exacerbations of cystic fibrosis associated with multiresistant bacteria: a randomised, double-blind, controlled clinical trial. Lancet 2005;366(9484):463-71. [CFGD REGISTER: PI198b] CENTRAL

References to studies excluded from this review

Moskowitz 2011 {published data only}

Moskowitz SM, Emerson JC, McNamara S, Shell RD, Orenstein DM, Rosenbluth D, et al. Randomized trial of biofilm testing to select antibiotics for cystic fibrosis airway infection. Pediatric Pulmonology 2011;46(2):184-92. [CFGD REGISTER: PI245] CENTRAL

Oermann 2013 {published data only}

Oermann CM, McCoy KS, Retsch-Bogart GZ, Gibson R, McKevitt M, Montgomery B. Antibiotic susceptibility in Pseudomonas Aeruginosa (PA) isolates following repeated exposure to aztreonam for inhalation solution (AZLI) in patients with cystic fibrosis. Pediatric Pulmonology 2009;44(Suppl 32):309. [ABSTRACT NO.: 278] CENTRAL
Oermann CM, McCoy KS, Retsch-Bogart GZ, Gibson R, McKevitt M, Montgomery B. Effect of repeated exposure to aztreonam for inhalation solution (AZLI) therapy on cystic fibrosis respiratory pathogens. Pediatric Pulmonology 2009;8(Suppl 2):335. [ABSTRACT NO.: 353] CENTRAL
Oermann CM, McCoy KS, Retsch-Bogart GZ, Gibson RL, Montgomery AB. Effect of multiple courses of Aztreonam Lysine for inhalation (AZLI) on FEV1 and weight in patients with cystic fibrosis (CF) and Pseudomonas aeruginosa (PA): analysis of 18 month data from CP-AI-006. Journal of Cystic Fibrosis 2009;8(Suppl 2):S28. [ABSTRACT NO.: 107] CENTRAL
Oermann CM, McCoy KS, Retsch-Bogart GZ, Gibson RL, Quittner AL, Montgomery AB. Adherence over multiple courses of Aztreonam for inhalation (AZLI): effect on disease-related endpoints in patients with cystic fibrosis (CF) and Pseudomonas aeruginosa (PA). Journal of Cystic Fibrosis 2009;8(Suppl 2):S28. [ABSTRACT NO.: 109] CENTRAL
Oermann CM, Retsch-Bogart GZ, Quittner AL, Gibson RL, McCoy KS, Montgomery AB, et al. An 18-month study of the safety and efficacy of repeated courses of inhaled aztreonam lysine in cystic fibrosis. Pediatric Pulmonology2010;45(11):1121-34. 5500100000003719CENTRAL

Wainwright 2011 {published data only}

Wainwright C, Nakamura C, Geller D, Montgomery AB. A double-blind, multinational, randomized, placebo-controlled trial evaluating aztreonam for inhalation solution (AZLI) in patients with cystic fibrosis (CF), mild lung disease and P. aeruginosa. Journal of Cystic Fibrosis 2010;9(Suppl 1):S22. [ABSTRACT NO.: 81] [CFGD REGISTER: PI243a] CENTRAL
Wainwright CE, Quittner AL, Geller DE, Nakamura C, Wooldridge JL, Gibson RL, et al. Aztreonam for inhalation solution (AZLI) in patients with cystic fibrosis, mild lung impairment, and P. aeruginosa. Journal of Cystic Fibrosis 2011;10(4):234-42. [CFGD REGISTER: PI243b] CENTRAL

Yau 2015 {published data only}

Ratjen F, Stanojevic S, Sonneveld N, Grasemann H, Yau Y, Tullis E, et al. Predictors of response to antibiotic treatment of pulmonary exacerbations in cystic fibrosis patients. Pediatric Pulmonology 2014;49 Suppl 38:355. [ABSTRACT NO.: 384] [CENTRAL: 1012525] [CFGD REGISTER: PI244c] CENTRAL
Waters V, Ratjen F, Tullis E, Corey M, Matukas L, Leahy R, et al. Randomized double blind controlled trial of the use of a biofilm antimicrobial susceptibility assay to guide antibiotic therapy in chronic pseudomonas aeruginosa infected cystic fibrosis patients. Pediatric Pulmonology 2010;45 Suppl 33:339. [ABSTRACT NO.: 311] [CENTRAL: 848814] [CFGD REGISTER: PI244a] CENTRAL
Waters V, Yau Y. Use of a biofilm antimicrobial susceptibility assay to guide antibiotic therapy. //clinicaltrials.gov/show/NCT007865132015. [CENTRAL: 1050336] [CFGD REGISTER: PI244g] CENTRAL
Waters VJ, Ratjen F, Tullis E, Wilcox PG, Freitag A, Chilvers M, et al. Randomized controlled trial of biofilm antimicrobial susceptibility testing in pulmonary exacerbations in cystic fibrosis patients with chronic pseudomonas aeruginosa infection [abstract]. Pediatric Pulmonology 2014;49 Suppl 38:319, Abstract no: 287. [CFGD REGISTER: PI244b] CENTRAL
Waters VJ, Stanojevic S, Sonneveld N, Klingel M, Grasemann H, Yau YC, et al. Factors associated with response to treatment of pulmonary exacerbations in cystic fibrosis patients. Journal of Cystic Fibrosis 2015;14(6):755-62. [CFGD REGISTER: PI244h] CENTRAL [PMID: 25690407]
Yau YC, Ratjen F, Tullis E, Wilcox P, Freitag A, Chilvers M, et al. Randomized controlled trial of biofilm antimicrobial susceptibility testing in cystic fibrosis patients. Journal of Cystic Fibrosis 2015;14:262-6. [CENTRAL: 1015278] [CFGD REGISTER: PI244d] CENTRAL
Yau YCW, Ratjen F, Tullis E, Wilcox P, Freitag A, Chilvers M, et al. Online supplementary tables from "Randomized controlled trial of biofilm antimicrobial susceptibility testing in cystic fibrosis patients". Journal of Cystic Fibrosis 2015;14:1-4 online. [CENTRAL: 1050335] [CFGD REGISTER: PI244f] CENTRAL
Yau YCW, Ratjen F, Tullis E, Wilcox P, Freitag A, Chilvers M, et al. Online supplement to "Randomized controlled trial of biofilm antimicrobial susceptibility testing in cystic fibrosis patients". Journal of Cystic Fibrosis 2015;14:1-13 online. [CENTRAL: 1050334] [CFGD REGISTER: PI244e] CENTRAL

Aaron 2000

Aaron SD, Ferris W, Henry DA, Speert DP, Macdonald NE. Multiple combination bactericidal antibiotic testing for patients with cystic fibrosis infected with Burkholderia cepacia. American Journal of Respiratory and Critical Care Medicine 2000;161(4 Pt 1):1206-12.

Burns 2001

Burns JL, Gibson RL, McNamara S, Yim D, Emerson J, Rosenfeld M, et al. Longitudinal assessment of Pseudomonas aeruginosa in young children with cystic fibrosis. Journal of Infectious Diseases 2001;183(3):444-52.

Ceri 1999

Ceri H, Olson ME, Stremick C, Read RR, Morck D, Buret A. The Calgary Biofilm Device: new technology for rapid determination of antibiotic susceptibilities of bacterial biofilms. Journal of Clinical Microbiology 1999;37(6):1771-6.

Donner 2001

Donner A, Piaggio G, Villar J. Statistical methods for the meta-analysis of cluster randomized trials. Statistical Methods in Medical Research 2001;10(5):325-38.

Drenkard 2002

Drenkard E, Ausubel FM. Pseudomonas biofilm formation and antibiotic resistance are linked to phenotypic variation. Nature 2002;416(6882):740-3.

Equi 2002

Equi A, Balfour-Lynn IM, Bush A and Rosenthal M. Long term azithromycin in children with cystic fibrosis: a randomised, placebo-controlled crossover trial. Lancet 2002;360:978-84.

Farrell 2018

Farrell P, Férec C, Macek M, Frischer T, Renner S, Riss K, et al. Estimating the age of p.(Phe508del) with family studies of geographically distinct European populations and the early spread of cystic fibrosis. European Journal of Human Genetics 2018;2018(12):1832-9. [DOI: 10.1038/s41431-018-0234-z]

Foweraker 2005

Foweraker JE, Laughton CR, Brown DF, Bilton D. Phenotypic variability of Pseudomonas aeruginosa in sputa from patients with acute infective exacerbation of cystic fibrosis and its impact on the validity of antimicrobial susceptibility testing. Journal of Antimicrobial Chemotherapy 2005;55(6):921-7.

Gaillard 1995

Gaillard JL, Cahen P, Delacourt C, Silly C, Le Bourgeois M, Coustère C, et al. Correlation between activity of beta-lactam agents in vitro and bacteriological outcome in acute pulmonary exacerbations of cystic fibrosis. European Journal of Clinical Microbiology & Infectious Diseases: official publication of the European Society of Clinical Microbiology 1995;14(4):291-6.

Gibson 2003

Gibson RL, Burns JL and Ramsey BW. Pathophysiology and management of pulmonary infections in cystic fibrosis. American Journal of Respiratory and Critical Care Medicine 2003;168(8):918-51.

Henry 1992

Henry RL, Mellis CM, Petrovic L. Mucoid Pseudomonas aeruginosa is a marker of poor survival in cystic fibrosis. Pediatric Pulmonology 1992;12(3):158-61.

Higgins 2003

Higgins JPT, Thompson SG, Deeks JJ, Altman DG. Measuring inconsistency in meta-analyses. BMJ 2003;327(7414):557-60.

Higgins 2011

Higgins JP, Green S, editor(s). Cochrane Handbook for Systematic Reviews of Interventions Version 5.1.0 (updated March 2011). The Cochrane Collaboration, 2011. Available from handbook.cochrane.org.

Jüni 2001

Jüni P, Altman DG, Egger M. Systematic reviews in health care: Assessing the quality of controlled clinical trials. BMJ 2001;323(7303):42-6.

Kosorok 2001

Kosorok MR, Zeng L, West SE, Rock MJ, Splaingard ML, Laxova A, et al. Acceleration of lung disease in children with cystic fibrosis after Pseudomonas aeruginosa acquisition. Pediatric Pulmonology 2001;32(4):277-87.

Lee 2003

Lee TW, Brownlee KG, Conway SP, Denton M, Littlewood JM. Evaluation of a new definition for chronic Pseudomonas aeruginosa infection in cystic fibrosis patients. Journal of Cystic Fibrosis 2003;2(1):29-34.

Moskowitz 2004

Moskowitz SM, Foster JM, Emerson J, Burns JL. Clinically feasible biofilm susceptibility assay for isolates of Pseudomonas aeruginosa from patients with cystic fibrosis. Journal of Clinical Microbiology 2004;42(5):1915-22.

Moskowitz 2005

Moskowitz SM, Foster JM, Emerson JC, Gibson RL, Burns JL. Use of Pseudomonas biofilm susceptibilities to assign simulated antibiotic regimens for cystic fibrosis airway infection. Journal of Antimicrobial Chemotherapy 2005;56(5):879-86.

Pamukcu 1995

Pamukcu A, Bush A, Buchdahl R. Effects of pseudomonas aeruginosa colonization on lung function and anthropometric variables in children with cystic fibrosis. Pediatric Pulmonology 1995;19(1):10-5.

Parmar 1998

Parmar MK, Torri V, Stewart L. Extracting summary statistics to perform meta-analyses of the published literature for survival endpoints. Statistics in Medicine 1998;17(24):2815-34.

Prince 2002

Prince AS. Biofilms, antimicrobial resistance, and airway infection. The New England Journal of Medicine 2002;347(14):1110-1.

Regelmann 1990

Regelmann WE, Elliott GR, Warwick WJ and Clawson CC. Reduction of sputum Pseudomonas aeruginosa density by antibiotics improves lung function in cystic fibrosis more than do bronchodilators and chest physiotherapy alone. American Review of Respiratory Disease 1990;141(4 Pt 1):914-21.

Rosenfeld 2001

Rosenfeld M, Emerson J, Williams-Warren J, Pepe M, Smith A, Montgomery AB, et al. Defining a pulmonary exacerbation in cystic fibrosis. Journal of Pediatrics 2001;139(3):359-65.

Saiman 1996

Saiman L, Mehar F, Niu WW, Neu HC, Shaw KJ, Miller G, Prince A. Antibiotic susceptibility of multiply resistant Pseudomonas aeruginosa isolated from patients with cystic fibrosis, including candidates for transplantation. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 1996;23(3):532-7.

Saiman 2003

Saiman L, Marshall BC, Mayer-Hamblett N, Burns JL, Quittner AL, Cibene DA, et al. Azithromycin in patients with cystic fibrosis chronically infected with Pseudomonas aeruginosa: a randomized controlled trial. JAMA 2003;290(13):1749-56.

Singh 2000

Singh PK, Schaefer AL, Parsek MR, Moninger TO, Welsh MJ, Greenberg EP. Quorum-sensing signals indicate that cystic fibrosis lungs are infected with bacterial biofilms. Nature 2000;407(6805):762-4.

Smith 1999

Smith AL, Doershuk C, Goldman D, Gore E, Hilman B, Marks M, et al. Comparison of a B-lactam alone versus B-lactam and an aminoglycoside for a pulmonary exacerbation in cystic fibrosis. Journal of Pediatrics 1999;134(4):413-21.

Smith 2003

Smith AL, Fiel SB, Mayer-Hamblett N, Ramsey B, Burns JL. Susceptibility testing of Pseudomonas aeruginosa isolates and clinical response to parenteral antibiotic administration: lack of association in cystic fibrosis. Chest 2003;123(5):1495-502.

References to other published versions of this review

Waters 2008

Waters V, Ratjen F. Antimicrobial susceptibility testing for acute exacerbations in chronic infection of Pseudomonas aeruginosa in cystic fibrosis. Cochrane Database of Systematic Reviews 3, Issue 2008. Art. No: CD006961. [DOI: 10.1002/14651858.CD006961]

Waters 2015

Waters V, Ratjen F. Combination antimicrobial susceptibility testing for acute exacerbations in chronic infection of Pseudomonas aeruginosa in cystic fibrosis. Cochrane Database of Systematic Reviews 2015, Issue 11. Art. No: CD006961. [DOI: 10.1002/14651858.CD006961.pub3]

Waters 2017

Waters V, Ratjen F. Combination antimicrobial susceptibility testing for acute exacerbations in chronic infection of Pseudomonas aeruginosa in cystic fibrosis. Cochrane Database of Systematic Reviews 2017, Issue 6. Art. No: CD006961. [DOI: 10.1002/14651858.CD006961.pub4]

Characteristics of studies

Characteristics of included studies [ordered by study ID]

Aaron 2005

Study characteristics

Methods

Randomised, double‐blind controlled trial.

Parallel design.

Duration: 14 days treatment, follow up every 3 months for up to 4.5 years.

Location: multicentre, 10 sites in Canada and 2 in Australia.

Participants

Participants at least 12 years of age with CF chronically infected with multiresistant Burkholderia cepacia complex, Pseudomonas aeruginosa, Stenotrophomonas maltophilia, or Achromobacter xylosoxidans bacteria (at least 2 sputum cultures within the past 12 months that had grown these organisms).

132 participants with acute pulmonary exacerbations of CF (defined according to criteria published by the 1994 Cystic Fibrosis Foundation Microbiology and Infectious Disease Consensus Conference) infected with multiresistant bacteria randomised on admittance for treatment.

MCBT group

n = 64, 43 (67.2%) infected with Pseudomonas aeruginosa.

Age (mean (SD)): 29.5 (8.2) years.

Gender: 29 males, 35 females.

FEV1 % predicted (mean (SD)): 44·0 (16.4)%.

Diabetes: 15 (23.4%).

Pancreatic insufficiency: 63 (98.4%).

Liver disease: 6 (9.4%).

Conventional treatment group

n = 68, 39 (57.4%) infected with Pseudomonas aeruginosa.

Age (mean (SD)): 25.8 (6.5) years.

Gender: 31 males, 37 females.

FEV1 % predicted (mean (SD)): 39.1 (16.7)%.

Diabetes: 13 (19.1%).

Pancreatic insufficiency: 65 (95.6%).

Liver disease: 8 (11.8%).

Interventions

14‐day course of any two IV antibiotics chosen on the basis of MCBT or control (separate testing).

IV aminoglycosides were given once daily at 2 study sites, 2x daily at 1 site, and thrice daily at the 9 other sites. In each case MCBT orders, and control orders, conformed to the local centre’s treatment practice.

Outcomes

Lung function (FEV1 and FVC), time to next pulmonary exacerbation, length of hospital stay, sputum bacterial density, adverse events, mortality, dyspnoea, treatment failures, white blood cell counts, C‐reactive protein concentrations in serum, and erythrocyte sedimentation rates, compliance.

Notes

Study sample size was calculated based on expected median survival times to next exacerbation; 132 participants were randomised, resulting in 83% power to show a difference between the two treatment groups.

The study sponsors had no role in study design, data collection, data analysis, data interpretation, or writing of the report. The corresponding author had full access to all the data in the study and had final responsibility for the decision to submit for publication.

Risk of bias

Bias

Authors' judgement

Support for judgement

Random sequence generation (selection bias)

Low risk

Randomisation was done centrally through the research pharmacy using a computer‐generated random listing of the two treatment assignments blocked in groups of four and stratified by site.

Allocation concealment (selection bias)

Low risk

The research staff, participants and caregivers were unaware of the allocation.

The principal investigator in Ottawa (SDA) was the only physician with access to the MCBT test results and he ordered the MCBT‐directed therapy for all participants. The research pharmacist at each hospital was the only member of the investigative team aware of the randomisation assignment,

Blinding (performance bias and detection bias)
All outcomes

Low risk

Each hospital pharmacist prepared the two blinded IV antibiotics for administration (labelled “antibiotic #1” and “antibiotic #2”) and also prepared nebulised tobramycin, or nebulised identical placebo tobramycin, for each randomised patient. Blinded study drugs were administered on the hospital wards, or in some cases, in the participants' homes under supervision by home‐care nursing staff.

Incomplete outcome data (attrition bias)
All outcomes

Low risk

All 132 participants receiving an intervention were included in the final analysis (intention‐to‐treat analysis). There were no withdrawals from the study.

Selective reporting (reporting bias)

Low risk

Although the study itself reported all the data for all participants enrolled (n = 132), we were only able to retrieve 1 study outcome (time to subsequent exacerbation) for participants infected with P aeruginosa. However, this was the study's primary outcome and is a clinically relevant outcome to this review.

Other bias

Unclear risk

A potential limitation of this study is that antibiotics were prescribed for participants randomised to the MCBT arm by one investigator, whereas antibiotics were prescribed for participants randomised to the control arm by the participants' own doctors. This approach was necessary, since the local physicians had to remain blinded to the MCBT results, but it could have affected the study outcomes.

A second limitation is that this study was powered to show a 79% increase in the time to next exacerbation and did not have the statistical power to exclude a smaller effect of MCBT‐directed therapy.

Conventional clinical microbiological testing, and MCBT testing, involves the culture of planktonically growing bacteria (i.e. free floating bacteria growing in broth). Bacteria growing in biofilms, e.g. Pseudomonas aeruginosa, have been shown to be significantly more resistant to antimicrobials than those growing planktonically.

CF: cystic fibrosis
FEV1: forced expiratory volume in one second
FVC: forced vital capacity
IV: intravenous
MCBT: multiple combination bactericidal antibiotic testing
SD: standard deviation

Characteristics of excluded studies [ordered by study ID]

Study

Reason for exclusion

Moskowitz 2011

A trial of biofilm antimicrobial susceptibility testing.

Oermann 2013

Not a trial of combination antimicrobial susceptibility testing.

Wainwright 2011

Not a trial of combination antimicrobial susceptibility testing.

Yau 2015

A trial of biofilm antimicrobial susceptibility testing.

Risk of bias summary: review authors' judgements about each risk of bias item for each included study.

Figuras y tablas -
Figure 1

Risk of bias summary: review authors' judgements about each risk of bias item for each included study.

Summary of findings 1. Summary of findings for combination antimicrobial susceptibility testing compared with conventional treatment (separate testing) for pulmonary exacerbation due to Pseudomonas aeruginosa in people with cystic fibrosis

Combination antimicrobial susceptibility testing compared with conventional treatment (separate testing) for pulmonary exacerbation due to Pseudomonas aeruginosa in people with cystic fibrosis

Patient or population: adults and children with pulmonary exacerbation due to Pseudomonas aeruginosa

Settings: inpatient

Intervention: combination antimicrobial susceptibility testing

Comparison: conventional treatment (separate susceptibility testing)

Outcomes

Illustrative comparative risks* (95% CI)

Relative effect
(95% CI)

Number of participants
(studies)

Quality of the evidence
(GRADE)

Comments

Assumed risk

Corresponding risk

conventional treatment

combination susceptibility testing

Lung function
(FEV1 or FVC L/min or % predicted)

Follow up: 14 days treatment with follow up every 3 months for up to 4.5 years

Outcome not reported ‐ see comment.

N/A

N/A

N/A

Lung function outcomes were not reported separately for individuals with infection due to Pseudomonas aeruginosa.

Time to next exacerbation

Follow up: up to 4.5 years

The only data available for the time to next exacerbation due to Pseudomonas aeruginosa gave a hazard ratio of 0.82 for the conventional (control) group compared to the combination antimicrobial susceptibility testing group (95% CI 0.44 to 1.51) (P = 0.52).

N/A

1

(82)

⊕⊕⊕⊝
moderatea

Quality of life

Outcome not reported ‐ see comment.

N/A

N/A

N/A

This outcome was not reported in the included study.

Length of hospital stay

Follow up: up to 4.5 years

Outcome not reported ‐ see comment.

N/A

N/A

N/A

This outcome was not reported separately for people with infection due to Pseudomonas aeruginosa.

Sputum bacterial density (CFU/mL)

Follow up: up to 4.5 years

Outcome not reported ‐ see comment.

N/A

N/A

N/A

This outcome was not reported separately for people with infection due to Pseudomonas aeruginosa.

Adverse events

Follow up: up to 4.5 years

Outcome not reported ‐ see comment.

N/A

N/A

N/A

This outcome was not reported separately for people with infection due to Pseudomonas aeruginosa.

There were 9 serious adverse events in all participants: 2/64 in the combination antimicrobial susceptibility testing group and 7/68 in the control group (P = 0.17).

Mortality

Follow up: up to 4.5 years

Outcome not reported ‐ see comment.

N/A

N/A

N/A

This outcome was not reported separately for people with infection due to Pseudomonas aeruginosa.

There were 2 deaths in all participants during the study period, both in the control group.

*The basis for the assumed risk (e.g. the median control group risk across studies) is provided in footnotes. The corresponding risk (and its 95% confidence interval) is based on the assumed risk in the comparison group and the relative effect of the intervention (and its 95% CI).
CFU: colony forming units; CI: confidence interval; N/A: not applicable.

GRADE Working Group grades of evidence
High quality: further research is very unlikely to change our confidence in the estimate of effect.
Moderate quality: further research is likely to have an important impact on our confidence in the estimate of effect and may change the estimate.
Low quality: further research is very likely to have an important impact on our confidence in the estimate of effect and is likely to change the estimate.
Very low quality: we are very uncertain about the estimate.

a Downgraded once for imprecision as there is only one included study and therefore the number of participants is low.

Figuras y tablas -
Summary of findings 1. Summary of findings for combination antimicrobial susceptibility testing compared with conventional treatment (separate testing) for pulmonary exacerbation due to Pseudomonas aeruginosa in people with cystic fibrosis